Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Gm14665-201ENSMUST00000122294 557 ntBASIC11.41□□□□□ -0.58
Shank1D3YZU1 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Gm18730-201ENSMUST00000218038 343 ntBASIC11.41□□□□□ -0.58
Shank1D3YZU1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shank1D3YZU1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Gm23363-201ENSMUST00000175024 79 ntBASIC11.4□□□□□ -0.58
Shank1D3YZU1 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.4□□□□□ -0.58
Shank1D3YZU1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.4□□□□□ -0.58
Shank1D3YZU1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Shank1D3YZU1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shank1D3YZU1 Gm14832-201ENSMUST00000121289 322 ntBASIC11.4□□□□□ -0.59
Shank1D3YZU1 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Shank1D3YZU1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.4□□□□□ -0.59
Shank1D3YZU1 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Shank1D3YZU1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.4□□□□□ -0.59
Shank1D3YZU1 Gm9211-201ENSMUST00000182882 975 ntBASIC11.4□□□□□ -0.59
Shank1D3YZU1 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shank1D3YZU1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shank1D3YZU1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.59
Shank1D3YZU1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shank1D3YZU1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Shank1D3YZU1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.39□□□□□ -0.59
Shank1D3YZU1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Gm12015-201ENSMUST00000117065 843 ntBASIC11.39□□□□□ -0.59
Shank1D3YZU1 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Gm8018-201ENSMUST00000173536 789 ntBASIC11.39□□□□□ -0.59
Shank1D3YZU1 Gm6407-201ENSMUST00000176468 549 ntBASIC11.39□□□□□ -0.59
Shank1D3YZU1 Gm5070-201ENSMUST00000177599 862 ntBASIC11.39□□□□□ -0.59
Shank1D3YZU1 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Shank1D3YZU1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms