Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.21□□□□□ -0.77
Chd6A3KFM7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Chd6A3KFM7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Gm12986-201ENSMUST00000119037 967 ntBASIC10.21□□□□□ -0.78
Chd6A3KFM7 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.21□□□□□ -0.78
Chd6A3KFM7 Gm8584-201ENSMUST00000171982 758 ntBASIC10.21□□□□□ -0.78
Chd6A3KFM7 Gm9081-201ENSMUST00000182346 991 ntBASIC10.21□□□□□ -0.78
Chd6A3KFM7 Gm9022-201ENSMUST00000182482 992 ntBASIC10.21□□□□□ -0.78
Chd6A3KFM7 Gm5507-201ENSMUST00000091897 1008 ntBASIC10.21□□□□□ -0.78
Chd6A3KFM7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Chd6A3KFM7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Chd6A3KFM7 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm22846-201ENSMUST00000157706 270 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm17214-201ENSMUST00000164501 541 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm45094-201ENSMUST00000207013 617 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm5455-201ENSMUST00000058710 715 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm22133-201ENSMUST00000102082 109 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm11949-201ENSMUST00000117640 372 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm11500-201ENSMUST00000118237 601 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm18514-201ENSMUST00000218980 436 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.2□□□□□ -0.78
Chd6A3KFM7 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Chd6A3KFM7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Chd6A3KFM7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 126.1 ms