Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm12165-201ENSMUST00000117047 342 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a4A2AX52 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.74□□□□□ -0.69
Col6a4A2AX52 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm12380-201ENSMUST00000119012 544 ntBASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm14832-201ENSMUST00000121289 322 ntBASIC10.73□□□□□ -0.69
Col6a4A2AX52 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm37666-201ENSMUST00000194110 866 ntBASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm7600-201ENSMUST00000209657 785 ntBASIC10.73□□□□□ -0.69
Col6a4A2AX52 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.73□□□□□ -0.69
Col6a4A2AX52 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm17040-202ENSMUST00000170597 889 ntBASIC10.73□□□□□ -0.69
Col6a4A2AX52 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a4A2AX52 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm14460-201ENSMUST00000121511 639 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm37246-201ENSMUST00000192665 835 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm45219-201ENSMUST00000205602 465 ntBASIC10.72□□□□□ -0.69
Col6a4A2AX52 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.72□□□□□ -0.69
Col6a4A2AX52 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms