Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Smim17A0A504 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Smim17A0A504 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.5□□□□□ -0.57
Smim17A0A504 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.5□□□□□ -0.57
Smim17A0A504 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Smim17A0A504 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Gm11025-201ENSMUST00000140773 466 ntBASIC11.5□□□□□ -0.57
Smim17A0A504 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.5□□□□□ -0.57
Smim17A0A504 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smim17A0A504 Mir3113-201ENSMUST00000175478 76 ntBASIC11.5□□□□□ -0.57
Smim17A0A504 Gm21470-201ENSMUST00000187680 696 ntBASIC11.5□□□□□ -0.57
Smim17A0A504 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.5□□□□□ -0.57
Smim17A0A504 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.5□□□□□ -0.57
Smim17A0A504 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.5□□□□□ -0.57
Smim17A0A504 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.5□□□□□ -0.57
Smim17A0A504 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smim17A0A504 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smim17A0A504 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.5□□□□□ -0.57
Smim17A0A504 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.5□□□□□ -0.57
Smim17A0A504 Cog3-203ENSMUST00000227473 4197 ntBASIC11.5□□□□□ -0.57
Smim17A0A504 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.5□□□□□ -0.57
Smim17A0A504 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.5□□□□□ -0.57
Smim17A0A504 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smim17A0A504 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Smim17A0A504 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.49□□□□□ -0.57
Smim17A0A504 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.49□□□□□ -0.57
Smim17A0A504 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Smim17A0A504 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.49□□□□□ -0.57
Smim17A0A504 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.49□□□□□ -0.57
Smim17A0A504 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.49□□□□□ -0.57
Smim17A0A504 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.49□□□□□ -0.57
Smim17A0A504 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.49□□□□□ -0.57
Smim17A0A504 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.49□□□□□ -0.57
Smim17A0A504 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Gm38225-201ENSMUST00000194001 393 ntBASIC11.49□□□□□ -0.57
Smim17A0A504 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.49□□□□□ -0.57
Smim17A0A504 Gm8227-201ENSMUST00000223306 571 ntBASIC11.49□□□□□ -0.57
Smim17A0A504 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.49□□□□□ -0.57
Smim17A0A504 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Smim17A0A504 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.49□□□□□ -0.57
Smim17A0A504 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.49□□□□□ -0.57
Smim17A0A504 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.49□□□□□ -0.57
Smim17A0A504 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.49□□□□□ -0.57
Smim17A0A504 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.49□□□□□ -0.57
Smim17A0A504 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Smim17A0A504 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smim17A0A504 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms