Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 AY702102-202ENSMUST00000194651 1173 ntBASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm19184-201ENSMUST00000196798 928 ntBASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm13736-201ENSMUST00000119272 253 ntBASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.43■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm12957-201ENSMUST00000117835 377 ntBASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm13315-201ENSMUST00000120376 991 ntBASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm38002-201ENSMUST00000193255 180 ntBASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm5186-201ENSMUST00000218781 920 ntBASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Atg4a-psA0A0G2JFS9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms