Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Col4a4Q9QZR9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Gm5805-201ENSMUST00000072779 456 ntBASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col4a4Q9QZR9 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Gm42433-201ENSMUST00000196806 940 ntBASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Gm44315-201ENSMUST00000203041 219 ntBASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.42□□□□□ -0.42
Col4a4Q9QZR9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms