Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lima1Q9ERG0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lima1Q9ERG0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lima1Q9ERG0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lima1Q9ERG0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lima1Q9ERG0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lima1Q9ERG0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lima1Q9ERG0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lima1Q9ERG0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Mir6392-201ENSMUST00000184924 108 ntBASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lima1Q9ERG0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lima1Q9ERG0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.58□□□□□ -0.39
Lima1Q9ERG0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Lima1Q9ERG0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lima1Q9ERG0 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.58□□□□□ -0.39
Lima1Q9ERG0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lima1Q9ERG0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Gm15823-201ENSMUST00000064305 670 ntBASIC12.58□□□□□ -0.4
Lima1Q9ERG0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lima1Q9ERG0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lima1Q9ERG0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms