Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Gm25072-201ENSMUST00000175233 235 ntBASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Gm34023-201ENSMUST00000195539 217 ntBASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Gm25517-201ENSMUST00000083865 134 ntBASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-4Q9EQM3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Gm15881-201ENSMUST00000148792 942 ntBASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Gm8492-201ENSMUST00000182375 987 ntBASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Mir7221-201ENSMUST00000184009 72 ntBASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Gm37905-201ENSMUST00000195310 341 ntBASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-4Q9EQM3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-4Q9EQM3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-4Q9EQM3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-4Q9EQM3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.02□□□□□ -0.32
Nkx2-4Q9EQM3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nkx2-4Q9EQM3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Gm15573-201ENSMUST00000119487 540 ntBASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Gm9463-201ENSMUST00000206707 601 ntBASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Gm17827-201ENSMUST00000211825 742 ntBASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nkx2-4Q9EQM3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms