Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Gm11814-201ENSMUST00000119515 929 ntBASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Gm16296-201ENSMUST00000159905 325 ntBASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpne8Q9DC53 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Pck2-205ENSMUST00000226352 2784 ntBASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Gm24644-201ENSMUST00000157114 139 ntBASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Gm4271-201ENSMUST00000174444 973 ntBASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.26□□□□□ -0.29
Cpne8Q9DC53 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.26□□□□□ -0.29
Cpne8Q9DC53 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpne8Q9DC53 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Gm14760-201ENSMUST00000121831 999 ntBASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Gm9002-201ENSMUST00000178437 499 ntBASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cpne8Q9DC53 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne8Q9DC53 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne8Q9DC53 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne8Q9DC53 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.24□□□□□ -0.29
Cpne8Q9DC53 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cpne8Q9DC53 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms