Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.38□□□□□ -0.11
Smco2Q9DA21 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.38□□□□□ -0.11
Smco2Q9DA21 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.38□□□□□ -0.11
Smco2Q9DA21 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.38□□□□□ -0.11
Smco2Q9DA21 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco2Q9DA21 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.37□□□□□ -0.11
Smco2Q9DA21 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.37□□□□□ -0.11
Smco2Q9DA21 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Snord83b-201ENSMUST00000104546 94 ntBASIC14.37□□□□□ -0.11
Smco2Q9DA21 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Gm4986-201ENSMUST00000119731 549 ntBASIC14.37□□□□□ -0.11
Smco2Q9DA21 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Gm8738-201ENSMUST00000172606 329 ntBASIC14.37□□□□□ -0.11
Smco2Q9DA21 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Gm22121-201ENSMUST00000175148 54 ntBASIC14.37□□□□□ -0.11
Smco2Q9DA21 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.37□□□□□ -0.11
Smco2Q9DA21 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.37□□□□□ -0.11
Smco2Q9DA21 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco2Q9DA21 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.36□□□□□ -0.11
Smco2Q9DA21 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Gm12502-201ENSMUST00000120197 444 ntBASIC14.36□□□□□ -0.11
Smco2Q9DA21 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Gm6621-201ENSMUST00000193251 772 ntBASIC14.36□□□□□ -0.11
Smco2Q9DA21 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco2Q9DA21 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.36□□□□□ -0.11
Smco2Q9DA21 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco2Q9DA21 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms