Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Gm23363-201ENSMUST00000175024 79 ntBASIC14.94□□□□□ -0.02
Rufy3Q9D394 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.94□□□□□ -0.02
Rufy3Q9D394 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.94□□□□□ -0.02
Rufy3Q9D394 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rufy3Q9D394 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Gm4271-201ENSMUST00000174444 973 ntBASIC14.93□□□□□ -0.02
Rufy3Q9D394 Gm27486-201ENSMUST00000184923 80 ntBASIC14.93□□□□□ -0.02
Rufy3Q9D394 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rufy3Q9D394 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.92□□□□□ -0.02
Rufy3Q9D394 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.92□□□□□ -0.02
Rufy3Q9D394 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.92□□□□□ -0.02
Rufy3Q9D394 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.92□□□□□ -0.02
Rufy3Q9D394 Gm6091-201ENSMUST00000098307 165 ntBASIC14.92□□□□□ -0.02
Rufy3Q9D394 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.92□□□□□ -0.02
Rufy3Q9D394 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rufy3Q9D394 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rufy3Q9D394 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.91□□□□□ -0.02
Rufy3Q9D394 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Matn2-203ENSMUST00000226766 3252 ntBASIC14.91□□□□□ -0.02
Rufy3Q9D394 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Gm24644-201ENSMUST00000157114 139 ntBASIC14.91□□□□□ -0.02
Rufy3Q9D394 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.91□□□□□ -0.02
Rufy3Q9D394 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.91□□□□□ -0.02
Rufy3Q9D394 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.91□□□□□ -0.02
Rufy3Q9D394 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rufy3Q9D394 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms