Protein–RNA interactions for Protein: Q9D304

Rnf128, E3 ubiquitin-protein ligase RNF128, mousemouse

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf128Q9D304 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf128Q9D304 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rnf128Q9D304 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rnf128Q9D304 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.72□□□□□ -0.53
Rnf128Q9D304 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf128Q9D304 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf128Q9D304 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.71□□□□□ -0.53
Rnf128Q9D304 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.71□□□□□ -0.53
Rnf128Q9D304 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.71□□□□□ -0.53
Rnf128Q9D304 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.71□□□□□ -0.53
Rnf128Q9D304 Gm27331-201ENSMUST00000183705 60 ntBASIC11.71□□□□□ -0.53
Rnf128Q9D304 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Gm18062-201ENSMUST00000208020 547 ntBASIC11.71□□□□□ -0.53
Rnf128Q9D304 Gm18055-201ENSMUST00000208254 547 ntBASIC11.71□□□□□ -0.53
Rnf128Q9D304 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.71□□□□□ -0.53
Rnf128Q9D304 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.71□□□□□ -0.53
Rnf128Q9D304 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf128Q9D304 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rnf128Q9D304 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Gm29705-201ENSMUST00000212598 474 ntBASIC11.7□□□□□ -0.54
Rnf128Q9D304 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.7□□□□□ -0.54
Rnf128Q9D304 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.7□□□□□ -0.54
Rnf128Q9D304 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Rnf128Q9D304 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf128Q9D304 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf128Q9D304 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf128Q9D304 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf128Q9D304 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf128Q9D304 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf128Q9D304 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf128Q9D304 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.69□□□□□ -0.54
Rnf128Q9D304 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms