Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.06□□□□□ -0.48
Upk1aQ9D132 Gm16215-201ENSMUST00000161990 637 ntBASIC12.06□□□□□ -0.48
Upk1aQ9D132 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Gm6218-201ENSMUST00000219812 628 ntBASIC12.06□□□□□ -0.48
Upk1aQ9D132 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.06□□□□□ -0.48
Upk1aQ9D132 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Mir339-201ENSMUST00000083659 96 ntBASIC12.06□□□□□ -0.48
Upk1aQ9D132 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.06□□□□□ -0.48
Upk1aQ9D132 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Upk1aQ9D132 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Upk1aQ9D132 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Gm5687-201ENSMUST00000118252 640 ntBASIC12.05□□□□□ -0.48
Upk1aQ9D132 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.05□□□□□ -0.48
Upk1aQ9D132 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.05□□□□□ -0.48
Upk1aQ9D132 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.05□□□□□ -0.48
Upk1aQ9D132 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.05□□□□□ -0.48
Upk1aQ9D132 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.05□□□□□ -0.48
Upk1aQ9D132 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Upk1aQ9D132 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.04□□□□□ -0.48
Upk1aQ9D132 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.04□□□□□ -0.48
Upk1aQ9D132 Gm42599-201ENSMUST00000201308 469 ntBASIC12.04□□□□□ -0.48
Upk1aQ9D132 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Gm6458-201ENSMUST00000211573 635 ntBASIC12.04□□□□□ -0.48
Upk1aQ9D132 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.04□□□□□ -0.48
Upk1aQ9D132 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.04□□□□□ -0.48
Upk1aQ9D132 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk1aQ9D132 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms