Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shmt2Q9CZN7 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Gm6447-201ENSMUST00000118905 835 ntBASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Gm24196-201ENSMUST00000179161 110 ntBASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Gm5186-201ENSMUST00000218781 920 ntBASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.19□□□□□ -0.46
Shmt2Q9CZN7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm16202-201ENSMUST00000117532 544 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm10156-201ENSMUST00000122364 462 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm17150-201ENSMUST00000165577 381 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm8652-201ENSMUST00000181363 964 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm27847-201ENSMUST00000183711 107 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm27375-201ENSMUST00000183799 107 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm10012-201ENSMUST00000078252 192 ntBASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shmt2Q9CZN7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms