Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf111Q99ML9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Gm38671-201ENSMUST00000200573 130 ntBASIC12.38□□□□□ -0.43
Rnf111Q99ML9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf111Q99ML9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rnf111Q99ML9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf111Q99ML9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms