Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chmp1b1Q99LU0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp1b1Q99LU0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.47
Chmp1b1Q99LU0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp1b1Q99LU0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp1b1Q99LU0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chmp1b1Q99LU0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Gm14127-201ENSMUST00000117906 678 ntBASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Gm27486-201ENSMUST00000184923 80 ntBASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Gm7287-201ENSMUST00000205267 602 ntBASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Chmp1b1Q99LU0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm13612-201ENSMUST00000119276 390 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm6244-201ENSMUST00000178732 841 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm27839-201ENSMUST00000184242 106 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm44069-201ENSMUST00000204898 506 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Chmp1b1Q99LU0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chmp1b1Q99LU0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms