Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Gm12501-201ENSMUST00000119163 529 ntBASIC15.67■□□□□ 0.1
RtcbQ99LF4 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.67■□□□□ 0.1
RtcbQ99LF4 AC154252.2-201ENSMUST00000223593 767 ntBASIC15.67■□□□□ 0.1
RtcbQ99LF4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.67■□□□□ 0.1
RtcbQ99LF4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RtcbQ99LF4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Gm11989-201ENSMUST00000117240 672 ntBASIC15.66■□□□□ 0.1
RtcbQ99LF4 Gm11362-201ENSMUST00000118838 850 ntBASIC15.66■□□□□ 0.1
RtcbQ99LF4 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Rmrp-201ENSMUST00000157463 271 ntBASIC15.66■□□□□ 0.1
RtcbQ99LF4 Gm9540-201ENSMUST00000188230 478 ntBASIC15.66■□□□□ 0.1
RtcbQ99LF4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Gm37246-201ENSMUST00000192665 835 ntBASIC15.66■□□□□ 0.1
RtcbQ99LF4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Gm17827-201ENSMUST00000211825 742 ntBASIC15.66■□□□□ 0.1
RtcbQ99LF4 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.66■□□□□ 0.1
RtcbQ99LF4 AC133602.1-201ENSMUST00000227510 509 ntBASIC15.66■□□□□ 0.1
RtcbQ99LF4 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.66■□□□□ 0.1
RtcbQ99LF4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.66■□□□□ 0.1
RtcbQ99LF4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RtcbQ99LF4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.65■□□□□ 0.1
RtcbQ99LF4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RtcbQ99LF4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm7851-201ENSMUST00000117574 323 ntBASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm25881-201ENSMUST00000157783 103 ntBASIC15.65■□□□□ 0.1
RtcbQ99LF4 Mir7677-201ENSMUST00000184226 67 ntBASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm43962-201ENSMUST00000203898 190 ntBASIC15.65■□□□□ 0.1
RtcbQ99LF4 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm19994-201ENSMUST00000217086 586 ntBASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm270-201ENSMUST00000223010 976 ntBASIC15.65■□□□□ 0.1
RtcbQ99LF4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.65■□□□□ 0.1
RtcbQ99LF4 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.65■□□□□ 0.1
RtcbQ99LF4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RtcbQ99LF4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
RtcbQ99LF4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.64■□□□□ 0.1
RtcbQ99LF4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
RtcbQ99LF4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RtcbQ99LF4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RtcbQ99LF4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms