Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Gm16202-201ENSMUST00000117532 544 ntBASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Thumpd1Q99J36 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Gm14701-201ENSMUST00000117156 348 ntBASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Thumpd1Q99J36 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Gm14921-201ENSMUST00000118643 908 ntBASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Gm26308-201ENSMUST00000157768 69 ntBASIC11.35□□□□□ -0.59
Thumpd1Q99J36 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms