Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
Clip1Q922J3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip1Q922J3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Clip1Q922J3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Clip1Q922J3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC19.83■□□□□ 0.77
Clip1Q922J3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC19.83■□□□□ 0.77
Clip1Q922J3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clip1Q922J3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clip1Q922J3 Gm22334-201ENSMUST00000158070 133 ntBASIC19.83■□□□□ 0.77
Clip1Q922J3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC19.83■□□□□ 0.77
Clip1Q922J3 AY036118-201ENSMUST00000200021 923 ntBASIC19.83■□□□□ 0.77
Clip1Q922J3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clip1Q922J3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip1Q922J3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC19.83■□□□□ 0.77
Clip1Q922J3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip1Q922J3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip1Q922J3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip1Q922J3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip1Q922J3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip1Q922J3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip1Q922J3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip1Q922J3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
Clip1Q922J3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip1Q922J3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip1Q922J3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip1Q922J3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Clip1Q922J3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip1Q922J3 Gm12201-201ENSMUST00000120657 1234 ntBASIC19.83■□□□□ 0.76
Clip1Q922J3 Gm5523-201ENSMUST00000180415 997 ntBASIC19.83■□□□□ 0.76
Clip1Q922J3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC19.83■□□□□ 0.76
Clip1Q922J3 Gm7848-201ENSMUST00000210739 718 ntBASIC19.83■□□□□ 0.76
Clip1Q922J3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Gm5385-201ENSMUST00000118988 1559 ntBASIC19.82■□□□□ 0.76
Clip1Q922J3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Gm18626-201ENSMUST00000221512 1409 ntBASIC19.82■□□□□ 0.76
Clip1Q922J3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC19.82■□□□□ 0.76
Clip1Q922J3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Clip1Q922J3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC19.82■□□□□ 0.76
Clip1Q922J3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC19.82■□□□□ 0.76
Clip1Q922J3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Clip1Q922J3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC19.82■□□□□ 0.76
Clip1Q922J3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC19.82■□□□□ 0.76
Clip1Q922J3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC19.82■□□□□ 0.76
Clip1Q922J3 Gm21027-201ENSMUST00000219300 1236 ntBASIC19.82■□□□□ 0.76
Clip1Q922J3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC19.82■□□□□ 0.76
Clip1Q922J3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC19.82■□□□□ 0.76
Clip1Q922J3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC19.82■□□□□ 0.76
Clip1Q922J3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip1Q922J3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Clip1Q922J3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Gm6198-201ENSMUST00000191337 2929 ntBASIC19.81■□□□□ 0.76
Clip1Q922J3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
Clip1Q922J3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Gm38346-201ENSMUST00000192379 2639 ntBASIC19.81■□□□□ 0.76
Clip1Q922J3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Clip1Q922J3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC19.81■□□□□ 0.76
Clip1Q922J3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Clip1Q922J3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC19.81■□□□□ 0.76
Clip1Q922J3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC19.81■□□□□ 0.76
Clip1Q922J3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Clip1Q922J3 Gm24514-201ENSMUST00000174961 285 ntBASIC19.81■□□□□ 0.76
Clip1Q922J3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
Clip1Q922J3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Gm9996-201ENSMUST00000070359 913 ntBASIC19.81■□□□□ 0.76
Clip1Q922J3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Clip1Q922J3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip1Q922J3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Clip1Q922J3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms