Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ndc1Q8VCB1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Mir874-201ENSMUST00000104769 76 ntBASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Gm8738-201ENSMUST00000172606 329 ntBASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Gm2991-201ENSMUST00000173338 480 ntBASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Gm27243-201ENSMUST00000183964 521 ntBASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Gm32025-201ENSMUST00000217960 307 ntBASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.05□□□□□ -0.48
Ndc1Q8VCB1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm4986-201ENSMUST00000119731 549 ntBASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm12502-201ENSMUST00000120197 444 ntBASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm13297-201ENSMUST00000120205 934 ntBASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm7046-201ENSMUST00000221351 977 ntBASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm24526-201ENSMUST00000082921 158 ntBASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ndc1Q8VCB1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms