Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm1Q8VC85 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Gm37922-201ENSMUST00000195596 455 ntBASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.23□□□□□ -0.45
Lsm1Q8VC85 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lsm1Q8VC85 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms