Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.78□□□□□ -0.36
Vps39Q8R5L3 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps39Q8R5L3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vps39Q8R5L3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps39Q8R5L3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps39Q8R5L3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps39Q8R5L3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps39Q8R5L3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.77□□□□□ -0.36
Vps39Q8R5L3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Gm8805-201ENSMUST00000117848 313 ntBASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Proscos-202ENSMUST00000178990 666 ntBASIC12.77□□□□□ -0.37
Vps39Q8R5L3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Gm45384-201ENSMUST00000210451 277 ntBASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Gm9908-201ENSMUST00000211534 448 ntBASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Gm17794-201ENSMUST00000220252 955 ntBASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps39Q8R5L3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Gm14928-201ENSMUST00000120198 477 ntBASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Gm13123-201ENSMUST00000122173 492 ntBASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Gm2231-201ENSMUST00000125661 612 ntBASIC12.76□□□□□ -0.37
Vps39Q8R5L3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.76□□□□□ -0.37
Vps39Q8R5L3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Gm6745-201ENSMUST00000199216 526 ntBASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Gm8598-201ENSMUST00000221184 836 ntBASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Mir339-201ENSMUST00000083659 96 ntBASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vps39Q8R5L3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms