Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Gm18584-201ENSMUST00000203098 964 ntBASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Sf3a1Q8K4Z5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Gm3890-201ENSMUST00000182416 207 ntBASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Gm38092-201ENSMUST00000195600 653 ntBASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Gm19184-201ENSMUST00000196798 928 ntBASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Gm19309-201ENSMUST00000218295 205 ntBASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sf3a1Q8K4Z5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sf3a1Q8K4Z5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sf3a1Q8K4Z5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 195.2 ms