Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx54Q8K4L0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx54Q8K4L0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx54Q8K4L0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx54Q8K4L0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx54Q8K4L0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm13809-201ENSMUST00000117921 597 ntBASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm22144-201ENSMUST00000157402 102 ntBASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm23771-201ENSMUST00000178702 110 ntBASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm5852-201ENSMUST00000194119 1021 ntBASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm5542-201ENSMUST00000195485 1089 ntBASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm45909-201ENSMUST00000212413 1031 ntBASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx54Q8K4L0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx54Q8K4L0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Gm1848-201ENSMUST00000120711 789 ntBASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Gm8199-201ENSMUST00000121323 823 ntBASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Gm4879-201ENSMUST00000122190 1272 ntBASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Gm20392-201ENSMUST00000173047 701 ntBASIC16.56■□□□□ 0.24
Ddx54Q8K4L0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms