Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc38Q8CDN8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc38Q8CDN8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Gm14921-201ENSMUST00000118643 908 ntBASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Gm11637-201ENSMUST00000120601 592 ntBASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Gm6244-201ENSMUST00000178732 841 ntBASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Gm37497-201ENSMUST00000195830 798 ntBASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc38Q8CDN8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Gm14704-201ENSMUST00000120300 874 ntBASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Gm16479-201ENSMUST00000121706 932 ntBASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Gm24196-201ENSMUST00000179161 110 ntBASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc38Q8CDN8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms