Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Gm15920-201ENSMUST00000118998 402 ntBASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Gm24694-201ENSMUST00000180054 110 ntBASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Gm27663-201ENSMUST00000184839 110 ntBASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lysmd4Q8CC84 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Map1b-203ENSMUST00000223725 2669 ntBASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Gm16202-201ENSMUST00000117532 544 ntBASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Gm6458-201ENSMUST00000211573 635 ntBASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lysmd4Q8CC84 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms