Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Gm43118-201ENSMUST00000199149 775 ntBASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Usp44Q8C2S0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Gm44405-201ENSMUST00000198952 126 ntBASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Usp44Q8C2S0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Gm45880-201ENSMUST00000213041 853 ntBASIC14.88□□□□□ -0.03
Usp44Q8C2S0 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Gm9823-201ENSMUST00000051212 327 ntBASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Usp44Q8C2S0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Usp44Q8C2S0 Gm12742-201ENSMUST00000117326 410 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms