Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gm13019-201ENSMUST00000120000 276 ntBASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gm45310-201ENSMUST00000210436 275 ntBASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smg1Q8BKX6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm15744-201ENSMUST00000161734 213 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm7211-201ENSMUST00000172692 1118 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Trav11n-201ENSMUST00000200113 343 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm8199-201ENSMUST00000121323 823 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm8737-201ENSMUST00000122208 642 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Rprl1-201ENSMUST00000158050 327 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm7719-201ENSMUST00000182374 975 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smg1Q8BKX6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smg1Q8BKX6 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smg1Q8BKX6 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smg1Q8BKX6 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.47□□□□□ -0.73
Smg1Q8BKX6 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smg1Q8BKX6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smg1Q8BKX6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.47□□□□□ -0.73
Smg1Q8BKX6 Gm4604-201ENSMUST00000025040 390 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms