Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Gm15693-201ENSMUST00000120470 637 ntBASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc5a7Q8BGY9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Slc5a7Q8BGY9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Mir686-201ENSMUST00000102174 109 ntBASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gm15467-201ENSMUST00000120582 445 ntBASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gm10253-201ENSMUST00000194270 940 ntBASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gm8227-201ENSMUST00000223306 571 ntBASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Slc5a7Q8BGY9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms