Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Gm22133-201ENSMUST00000102082 109 ntBASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Gm14263-201ENSMUST00000117955 746 ntBASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Gm26286-201ENSMUST00000104166 134 ntBASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Gm13408-201ENSMUST00000119822 798 ntBASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Gm13935-201ENSMUST00000121859 798 ntBASIC14.76□□□□□ -0.05
Nup98Q6PFD9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.76□□□□□ -0.05
Nup98Q6PFD9 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Gm44126-201ENSMUST00000204831 514 ntBASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nup98Q6PFD9 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Gm7722-201ENSMUST00000120646 741 ntBASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Gm14247-201ENSMUST00000120950 237 ntBASIC14.75□□□□□ -0.05
Nup98Q6PFD9 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Gm17931-201ENSMUST00000208132 634 ntBASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nup98Q6PFD9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Gm22902-201ENSMUST00000158488 302 ntBASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Gm3332-201ENSMUST00000189337 928 ntBASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Gm21811-201ENSMUST00000096485 930 ntBASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nup98Q6PFD9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Gm13035-201ENSMUST00000117496 342 ntBASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Gm7467-201ENSMUST00000185173 652 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms