Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm5879-201ENSMUST00000089501 1209 ntBASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Grk6-205ENSMUST00000224653 2976 ntBASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slx4Q6P1D7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Slx4Q6P1D7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Gm42840-201ENSMUST00000200303 2251 ntBASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC19.25■□□□□ 0.67
Slx4Q6P1D7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm12579-201ENSMUST00000118040 783 ntBASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm5638-201ENSMUST00000118618 1258 ntBASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm13668-201ENSMUST00000119237 1001 ntBASIC19.24■□□□□ 0.67
Slx4Q6P1D7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm18159-201ENSMUST00000174516 1070 ntBASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm9022-201ENSMUST00000182482 992 ntBASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm37299-201ENSMUST00000193951 826 ntBASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm44329-201ENSMUST00000197469 112 ntBASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slx4Q6P1D7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Gm24231-201ENSMUST00000104315 133 ntBASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Gm14585-201ENSMUST00000120713 634 ntBASIC19.23■□□□□ 0.67
Slx4Q6P1D7 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Gm3793-201ENSMUST00000204973 672 ntBASIC19.23■□□□□ 0.67
Slx4Q6P1D7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slx4Q6P1D7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms