Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Tpm4Q6IRU2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Itm2b-204ENSMUST00000228637 783 ntBASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Tpm4Q6IRU2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Gm16202-201ENSMUST00000117532 544 ntBASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Gm13689-201ENSMUST00000119360 685 ntBASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Gm44397-201ENSMUST00000195950 113 ntBASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Gm6983-201ENSMUST00000214912 628 ntBASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Gm16372-201ENSMUST00000073088 450 ntBASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.26□□□□□ -0.13
Tpm4Q6IRU2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Gm12341-201ENSMUST00000119724 503 ntBASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Gm28631-201ENSMUST00000190740 334 ntBASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Gm20949-201ENSMUST00000206478 952 ntBASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Gm6458-201ENSMUST00000211573 635 ntBASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tpm4Q6IRU2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms