Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Notch3Q61982 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Notch3Q61982 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Notch3Q61982 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Notch3Q61982 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Notch3Q61982 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.82□□□□□ -0.84
Notch3Q61982 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Notch3Q61982 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Notch3Q61982 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Notch3Q61982 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.82□□□□□ -0.84
Notch3Q61982 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.82□□□□□ -0.84
Notch3Q61982 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.82□□□□□ -0.84
Notch3Q61982 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Notch3Q61982 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Notch3Q61982 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Notch3Q61982 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Notch3Q61982 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Notch3Q61982 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.82□□□□□ -0.84
Notch3Q61982 Gm10434-201ENSMUST00000101158 471 ntBASIC9.82□□□□□ -0.84
Notch3Q61982 Gm6447-201ENSMUST00000118905 835 ntBASIC9.82□□□□□ -0.84
Notch3Q61982 Gm14726-201ENSMUST00000120623 896 ntBASIC9.82□□□□□ -0.84
Notch3Q61982 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.82□□□□□ -0.84
Notch3Q61982 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.82□□□□□ -0.84
Notch3Q61982 Gm45186-201ENSMUST00000206874 478 ntBASIC9.82□□□□□ -0.84
Notch3Q61982 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.82□□□□□ -0.84
Notch3Q61982 Gm19163-201ENSMUST00000223313 780 ntBASIC9.82□□□□□ -0.84
Notch3Q61982 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Notch3Q61982 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.82□□□□□ -0.84
Notch3Q61982 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Notch3Q61982 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.82□□□□□ -0.84
Notch3Q61982 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Notch3Q61982 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.81□□□□□ -0.84
Notch3Q61982 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.81□□□□□ -0.84
Notch3Q61982 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC9.81□□□□□ -0.84
Notch3Q61982 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.81□□□□□ -0.84
Notch3Q61982 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.81□□□□□ -0.84
Notch3Q61982 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.81□□□□□ -0.84
Notch3Q61982 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Gm2231-201ENSMUST00000125661 612 ntBASIC9.81□□□□□ -0.84
Notch3Q61982 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.81□□□□□ -0.84
Notch3Q61982 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Notch3Q61982 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Notch3Q61982 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Notch3Q61982 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms