Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm11524-201ENSMUST00000119349 807 ntBASIC11.95□□□□□ -0.5
Sox17Q61473 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Sox17Q61473 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox17Q61473 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.95□□□□□ -0.5
Sox17Q61473 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.95□□□□□ -0.5
Sox17Q61473 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.95□□□□□ -0.5
Sox17Q61473 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox17Q61473 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sox17Q61473 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox17Q61473 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox17Q61473 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox17Q61473 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox17Q61473 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox17Q61473 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.94□□□□□ -0.5
Sox17Q61473 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox17Q61473 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Sox17Q61473 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Mir686-201ENSMUST00000102174 109 ntBASIC11.94□□□□□ -0.5
Sox17Q61473 Gm13453-201ENSMUST00000118708 357 ntBASIC11.94□□□□□ -0.5
Sox17Q61473 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox17Q61473 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Gm27430-201ENSMUST00000184585 107 ntBASIC11.94□□□□□ -0.5
Sox17Q61473 Gm44333-201ENSMUST00000197168 107 ntBASIC11.94□□□□□ -0.5
Sox17Q61473 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.94□□□□□ -0.5
Sox17Q61473 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.94□□□□□ -0.5
Sox17Q61473 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.94□□□□□ -0.5
Sox17Q61473 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox17Q61473 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox17Q61473 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox17Q61473 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox17Q61473 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.94□□□□□ -0.5
Sox17Q61473 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.93□□□□□ -0.5
Sox17Q61473 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox17Q61473 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Sox17Q61473 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox17Q61473 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Sox17Q61473 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Sox17Q61473 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Sox17Q61473 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Sox17Q61473 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.93□□□□□ -0.5
Sox17Q61473 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox17Q61473 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.93□□□□□ -0.5
Sox17Q61473 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.93□□□□□ -0.5
Sox17Q61473 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox17Q61473 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms