Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.85□□□□□ -0.35
Six4Q61321 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Six4Q61321 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Six4Q61321 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Gm15703-201ENSMUST00000120250 880 ntBASIC12.85□□□□□ -0.35
Six4Q61321 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.85□□□□□ -0.35
Six4Q61321 Gm13316-201ENSMUST00000140537 691 ntBASIC12.85□□□□□ -0.35
Six4Q61321 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Gm17420-201ENSMUST00000164753 153 ntBASIC12.85□□□□□ -0.35
Six4Q61321 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Gm43118-201ENSMUST00000199149 775 ntBASIC12.85□□□□□ -0.35
Six4Q61321 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.85□□□□□ -0.35
Six4Q61321 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Six4Q61321 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Six4Q61321 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six4Q61321 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Six4Q61321 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Six4Q61321 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.84□□□□□ -0.35
Six4Q61321 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Six4Q61321 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Gm6023-201ENSMUST00000118217 606 ntBASIC12.84□□□□□ -0.35
Six4Q61321 Gm13492-201ENSMUST00000119772 665 ntBASIC12.84□□□□□ -0.35
Six4Q61321 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.84□□□□□ -0.35
Six4Q61321 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.84□□□□□ -0.35
Six4Q61321 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.84□□□□□ -0.35
Six4Q61321 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.84□□□□□ -0.35
Six4Q61321 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Six4Q61321 Gm10478-201ENSMUST00000084451 396 ntBASIC12.84□□□□□ -0.35
Six4Q61321 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.84□□□□□ -0.35
Six4Q61321 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.84□□□□□ -0.35
Six4Q61321 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Six4Q61321 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six4Q61321 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.83□□□□□ -0.35
Six4Q61321 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Six4Q61321 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Six4Q61321 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Six4Q61321 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Six4Q61321 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.83□□□□□ -0.36
Six4Q61321 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Gm11793-201ENSMUST00000120433 981 ntBASIC12.83□□□□□ -0.36
Six4Q61321 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Six4Q61321 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.83□□□□□ -0.36
Six4Q61321 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Six4Q61321 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six4Q61321 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms