Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm22594-201ENSMUST00000104251 130 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm15703-201ENSMUST00000120250 880 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm9166-201ENSMUST00000120293 561 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm13263-201ENSMUST00000121271 838 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.25□□□□□ -0.45
Col12a1Q60847 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.25□□□□□ -0.45
Col12a1Q60847 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.25□□□□□ -0.45
Col12a1Q60847 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.25□□□□□ -0.45
Col12a1Q60847 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.25□□□□□ -0.45
Col12a1Q60847 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Gm8343-201ENSMUST00000182705 994 ntBASIC12.25□□□□□ -0.45
Col12a1Q60847 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.25□□□□□ -0.45
Col12a1Q60847 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.25□□□□□ -0.45
Col12a1Q60847 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.25□□□□□ -0.45
Col12a1Q60847 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.25□□□□□ -0.45
Col12a1Q60847 AC124392.1-201ENSMUST00000225172 5324 ntBASIC12.25□□□□□ -0.45
Col12a1Q60847 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col12a1Q60847 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.25□□□□□ -0.45
Col12a1Q60847 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm26286-201ENSMUST00000104166 134 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm18514-201ENSMUST00000218980 436 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col12a1Q60847 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm22146-201ENSMUST00000157397 288 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Grk6-205ENSMUST00000224653 2976 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm16380-201ENSMUST00000077997 478 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms