Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rc3h1Q4VGL6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gm14716-201ENSMUST00000120138 718 ntBASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gm11597-201ENSMUST00000121423 964 ntBASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gm8712-201ENSMUST00000221090 701 ntBASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rc3h1Q4VGL6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Gm13315-201ENSMUST00000120376 991 ntBASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.71□□□□□ -0.05
Rc3h1Q4VGL6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms