Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Gm10076-201ENSMUST00000073238 384 ntBASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Gm15711-201ENSMUST00000118889 535 ntBASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.82□□□□□ -0.68
Sdk1Q3UH53 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.82□□□□□ -0.68
Sdk1Q3UH53 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sdk1Q3UH53 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Gm45925-201ENSMUST00000218882 744 ntBASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sdk1Q3UH53 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sdk1Q3UH53 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms