Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Brf2Q3UAW9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Brf2Q3UAW9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Gm11478-201ENSMUST00000117851 599 ntBASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Gm22331-201ENSMUST00000158066 136 ntBASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Gm17208-201ENSMUST00000168388 535 ntBASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Gm23363-201ENSMUST00000175024 79 ntBASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Brf2Q3UAW9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Gm24644-201ENSMUST00000157114 139 ntBASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.01□□□□□ -0.49
Brf2Q3UAW9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Brf2Q3UAW9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms