Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gm43094-201ENSMUST00000196549 921 ntBASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gm6745-201ENSMUST00000199216 526 ntBASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gm18307-201ENSMUST00000206864 949 ntBASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf149Q3U2C5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Gm12485-201ENSMUST00000119641 291 ntBASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Gm12341-201ENSMUST00000119724 503 ntBASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Gm45668-201ENSMUST00000211271 493 ntBASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf149Q3U2C5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf149Q3U2C5 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf149Q3U2C5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf149Q3U2C5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf149Q3U2C5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf149Q3U2C5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Rnf149Q3U2C5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.46□□□□□ -0.58
Rnf149Q3U2C5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf149Q3U2C5 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf149Q3U2C5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rnf149Q3U2C5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf149Q3U2C5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Rnf149Q3U2C5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf149Q3U2C5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms