Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp39Q3TIX9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Usp39Q3TIX9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp39Q3TIX9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms