Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Gm14263-201ENSMUST00000117955 746 ntBASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Gm13665-201ENSMUST00000120830 528 ntBASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Treml4Q3LRV9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Treml4Q3LRV9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Treml4Q3LRV9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Treml4Q3LRV9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Treml4Q3LRV9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Treml4Q3LRV9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Treml4Q3LRV9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Gm14028-201ENSMUST00000117434 479 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Gm17208-201ENSMUST00000168388 535 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Mir6979-201ENSMUST00000183927 56 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Gm42997-202ENSMUST00000200321 985 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Treml4Q3LRV9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Treml4Q3LRV9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms