Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 AC107752.1-201ENSMUST00000219362 469 ntBASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Gm9856-201ENSMUST00000217077 2578 ntBASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Mir598-201ENSMUST00000102094 79 ntBASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Gm8019-201ENSMUST00000119317 587 ntBASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Gm14113-201ENSMUST00000121399 976 ntBASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Gm16560-201ENSMUST00000159115 404 ntBASIC6.53□□□□□ -1.36
Ush2AQ2QI47 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Gm43163-201ENSMUST00000196571 442 ntBASIC6.53□□□□□ -1.36
Ush2AQ2QI47 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 AC107711.4-201ENSMUST00000228948 440 ntBASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ush2AQ2QI47 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.36
Ush2AQ2QI47 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC6.52□□□□□ -1.36
Ush2AQ2QI47 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm16184-201ENSMUST00000162324 573 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 AC154461.1-201ENSMUST00000224207 1005 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Mir3091-201ENSMUST00000175086 76 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm43380-201ENSMUST00000200421 220 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 AC164614.1-201ENSMUST00000216038 397 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 AC121567.1-201ENSMUST00000227213 842 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm43167-201ENSMUST00000202001 1606 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm14630-201ENSMUST00000118057 246 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm16209-201ENSMUST00000118457 627 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm10171-201ENSMUST00000126220 628 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 AC159006.3-201ENSMUST00000226918 664 ntBASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ush2AQ2QI47 Gm10233-201ENSMUST00000089275 628 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms