Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Col17a1Q07563 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Col17a1Q07563 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col17a1Q07563 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col17a1Q07563 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Col17a1Q07563 Gm23612-201ENSMUST00000103823 110 ntBASIC19.14■□□□□ 0.65
Col17a1Q07563 Gm13281-201ENSMUST00000120871 567 ntBASIC19.14■□□□□ 0.65
Col17a1Q07563 Gm23119-201ENSMUST00000158610 140 ntBASIC19.14■□□□□ 0.65
Col17a1Q07563 Gm23576-201ENSMUST00000179918 110 ntBASIC19.14■□□□□ 0.65
Col17a1Q07563 Gm9162-201ENSMUST00000182081 991 ntBASIC19.14■□□□□ 0.65
Col17a1Q07563 Mir8093-201ENSMUST00000185043 137 ntBASIC19.14■□□□□ 0.65
Col17a1Q07563 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col17a1Q07563 Gm37452-201ENSMUST00000194416 1160 ntBASIC19.14■□□□□ 0.65
Col17a1Q07563 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC19.14■□□□□ 0.65
Col17a1Q07563 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Col17a1Q07563 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col17a1Q07563 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Col17a1Q07563 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col17a1Q07563 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Col17a1Q07563 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC19.13■□□□□ 0.65
Col17a1Q07563 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Col17a1Q07563 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col17a1Q07563 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC19.13■□□□□ 0.65
Col17a1Q07563 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC19.13■□□□□ 0.65
Col17a1Q07563 Gm5395-201ENSMUST00000121650 915 ntBASIC19.13■□□□□ 0.65
Col17a1Q07563 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Gm9081-201ENSMUST00000182346 991 ntBASIC19.13■□□□□ 0.65
Col17a1Q07563 Gm17944-201ENSMUST00000186351 643 ntBASIC19.13■□□□□ 0.65
Col17a1Q07563 Gm43852-201ENSMUST00000202098 917 ntBASIC19.13■□□□□ 0.65
Col17a1Q07563 AC162932.1-201ENSMUST00000219209 872 ntBASIC19.13■□□□□ 0.65
Col17a1Q07563 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Col17a1Q07563 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Col17a1Q07563 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Gm4900-201ENSMUST00000222046 1628 ntBASIC19.13■□□□□ 0.65
Col17a1Q07563 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col17a1Q07563 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Col17a1Q07563 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col17a1Q07563 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC19.12■□□□□ 0.65
Col17a1Q07563 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Col17a1Q07563 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC19.12■□□□□ 0.65
Col17a1Q07563 Gm5190-201ENSMUST00000192434 357 ntBASIC19.12■□□□□ 0.65
Col17a1Q07563 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC19.12■□□□□ 0.65
Col17a1Q07563 Gm7939-201ENSMUST00000201233 1050 ntBASIC19.12■□□□□ 0.65
Col17a1Q07563 BC080696-201ENSMUST00000202858 1218 ntBASIC19.12■□□□□ 0.65
Col17a1Q07563 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Col17a1Q07563 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col17a1Q07563 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 AC117194.1-201ENSMUST00000224847 3002 ntBASIC19.12■□□□□ 0.65
Col17a1Q07563 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col17a1Q07563 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 AC174797.1-201ENSMUST00000224339 1649 ntBASIC19.11■□□□□ 0.65
Col17a1Q07563 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Col17a1Q07563 Gm12418-201ENSMUST00000118116 942 ntBASIC19.11■□□□□ 0.65
Col17a1Q07563 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC19.11■□□□□ 0.65
Col17a1Q07563 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col17a1Q07563 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Olfr584-201ENSMUST00000098210 964 ntBASIC19.11■□□□□ 0.65
Col17a1Q07563 Gm43267-201ENSMUST00000199664 1796 ntBASIC19.11■□□□□ 0.65
Col17a1Q07563 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Gm5466-201ENSMUST00000119395 1890 ntBASIC19.11■□□□□ 0.65
Col17a1Q07563 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col17a1Q07563 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms