Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VcpQ01853 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
VcpQ01853 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.64□□□□□ -0.23
VcpQ01853 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Gm6023-201ENSMUST00000118217 606 ntBASIC13.64□□□□□ -0.23
VcpQ01853 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.64□□□□□ -0.23
VcpQ01853 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Gm7029-201ENSMUST00000173226 450 ntBASIC13.64□□□□□ -0.23
VcpQ01853 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.64□□□□□ -0.23
VcpQ01853 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
VcpQ01853 Gm5523-201ENSMUST00000180415 997 ntBASIC13.64□□□□□ -0.23
VcpQ01853 Gm19931-201ENSMUST00000198920 368 ntBASIC13.64□□□□□ -0.23
VcpQ01853 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.64□□□□□ -0.23
VcpQ01853 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.64□□□□□ -0.23
VcpQ01853 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
VcpQ01853 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
VcpQ01853 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.64□□□□□ -0.23
VcpQ01853 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.64□□□□□ -0.23
VcpQ01853 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VcpQ01853 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VcpQ01853 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
VcpQ01853 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VcpQ01853 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VcpQ01853 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Gm4986-201ENSMUST00000119731 549 ntBASIC13.63□□□□□ -0.23
VcpQ01853 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.63□□□□□ -0.23
VcpQ01853 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.63□□□□□ -0.23
VcpQ01853 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.63□□□□□ -0.23
VcpQ01853 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.63□□□□□ -0.23
VcpQ01853 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VcpQ01853 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VcpQ01853 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
VcpQ01853 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.62□□□□□ -0.23
VcpQ01853 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.62□□□□□ -0.23
VcpQ01853 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.62□□□□□ -0.23
VcpQ01853 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.62□□□□□ -0.23
VcpQ01853 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.62□□□□□ -0.23
VcpQ01853 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Gm6447-201ENSMUST00000118905 835 ntBASIC13.62□□□□□ -0.23
VcpQ01853 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.62□□□□□ -0.23
VcpQ01853 Gm6222-202ENSMUST00000182143 629 ntBASIC13.62□□□□□ -0.23
VcpQ01853 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.62□□□□□ -0.23
VcpQ01853 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.62□□□□□ -0.23
VcpQ01853 Gm8099-201ENSMUST00000200510 742 ntBASIC13.62□□□□□ -0.23
VcpQ01853 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
VcpQ01853 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
VcpQ01853 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.62□□□□□ -0.23
VcpQ01853 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
VcpQ01853 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
VcpQ01853 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.62□□□□□ -0.23
VcpQ01853 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VcpQ01853 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms