Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Thumpd3P97770 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Thumpd3P97770 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Thumpd3P97770 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Thumpd3P97770 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Thumpd3P97770 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Thumpd3P97770 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.99□□□□□ -0.33
Thumpd3P97770 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.99□□□□□ -0.33
Thumpd3P97770 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.99□□□□□ -0.33
Thumpd3P97770 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Thumpd3P97770 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.99□□□□□ -0.33
Thumpd3P97770 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.99□□□□□ -0.33
Thumpd3P97770 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Gm12928-201ENSMUST00000117115 573 ntBASIC12.99□□□□□ -0.33
Thumpd3P97770 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.99□□□□□ -0.33
Thumpd3P97770 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.99□□□□□ -0.33
Thumpd3P97770 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Gm2495-201ENSMUST00000191160 466 ntBASIC12.99□□□□□ -0.33
Thumpd3P97770 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Thumpd3P97770 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Thumpd3P97770 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.99□□□□□ -0.33
Thumpd3P97770 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Thumpd3P97770 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Thumpd3P97770 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Thumpd3P97770 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.98□□□□□ -0.33
Thumpd3P97770 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.98□□□□□ -0.33
Thumpd3P97770 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.98□□□□□ -0.33
Thumpd3P97770 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.98□□□□□ -0.33
Thumpd3P97770 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Thumpd3P97770 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Thumpd3P97770 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Thumpd3P97770 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms