Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.93■□□□□ 0.14
Nkx2-3P97334 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm13045-201ENSMUST00000119019 712 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm29615-201ENSMUST00000185371 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm28224-201ENSMUST00000186078 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm29001-201ENSMUST00000186177 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm28292-201ENSMUST00000186593 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm28101-201ENSMUST00000187608 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm29076-201ENSMUST00000187689 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm28302-201ENSMUST00000187931 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm28646-201ENSMUST00000188220 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm9230-201ENSMUST00000188228 532 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm28205-201ENSMUST00000189177 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm29032-201ENSMUST00000189797 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm28695-201ENSMUST00000190300 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm37448-201ENSMUST00000192795 697 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.92■□□□□ 0.14
Nkx2-3P97334 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-3P97334 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Nkx2-3P97334 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.91■□□□□ 0.14
Nkx2-3P97334 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.91■□□□□ 0.14
Nkx2-3P97334 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Gm9211-201ENSMUST00000182882 975 ntBASIC15.91■□□□□ 0.14
Nkx2-3P97334 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Gm45770-201ENSMUST00000212105 616 ntBASIC15.91■□□□□ 0.14
Nkx2-3P97334 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Gm18730-201ENSMUST00000218038 343 ntBASIC15.91■□□□□ 0.14
Nkx2-3P97334 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.91■□□□□ 0.14
Nkx2-3P97334 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.91■□□□□ 0.14
Nkx2-3P97334 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.9■□□□□ 0.14
Nkx2-3P97334 Gm11450-201ENSMUST00000121144 333 ntBASIC15.9■□□□□ 0.14
Nkx2-3P97334 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nkx2-3P97334 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.9■□□□□ 0.14
Nkx2-3P97334 Gm19353-201ENSMUST00000184561 445 ntBASIC15.9■□□□□ 0.14
Nkx2-3P97334 Gm43378-201ENSMUST00000199336 582 ntBASIC15.9■□□□□ 0.14
Nkx2-3P97334 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms