Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.88□□□□□ -0.51
SgcdP82347 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.88□□□□□ -0.51
SgcdP82347 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.88□□□□□ -0.51
SgcdP82347 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.88□□□□□ -0.51
SgcdP82347 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.88□□□□□ -0.51
SgcdP82347 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SgcdP82347 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SgcdP82347 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SgcdP82347 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcdP82347 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
SgcdP82347 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.87□□□□□ -0.51
SgcdP82347 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.87□□□□□ -0.51
SgcdP82347 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.87□□□□□ -0.51
SgcdP82347 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.87□□□□□ -0.51
SgcdP82347 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.87□□□□□ -0.51
SgcdP82347 Gm15770-201ENSMUST00000117498 584 ntBASIC11.87□□□□□ -0.51
SgcdP82347 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
SgcdP82347 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SgcdP82347 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SgcdP82347 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SgcdP82347 Mir1938-201ENSMUST00000158746 100 ntBASIC11.87□□□□□ -0.51
SgcdP82347 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.87□□□□□ -0.51
SgcdP82347 Gm33320-201ENSMUST00000192232 530 ntBASIC11.87□□□□□ -0.51
SgcdP82347 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Gm43703-201ENSMUST00000200523 763 ntBASIC11.87□□□□□ -0.51
SgcdP82347 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Gm45668-201ENSMUST00000211271 493 ntBASIC11.87□□□□□ -0.51
SgcdP82347 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SgcdP82347 Gm16476-201ENSMUST00000221544 139 ntBASIC11.87□□□□□ -0.51
SgcdP82347 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
SgcdP82347 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
SgcdP82347 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.87□□□□□ -0.51
SgcdP82347 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SgcdP82347 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SgcdP82347 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.87□□□□□ -0.51
SgcdP82347 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
SgcdP82347 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.86□□□□□ -0.51
SgcdP82347 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
SgcdP82347 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SgcdP82347 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SgcdP82347 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.86□□□□□ -0.51
SgcdP82347 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.86□□□□□ -0.51
SgcdP82347 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.86□□□□□ -0.51
SgcdP82347 Mir6392-201ENSMUST00000184924 108 ntBASIC11.86□□□□□ -0.51
SgcdP82347 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Gm28760-201ENSMUST00000185995 736 ntBASIC11.86□□□□□ -0.51
SgcdP82347 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.86□□□□□ -0.51
SgcdP82347 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Gm9797-201ENSMUST00000052902 613 ntBASIC11.86□□□□□ -0.51
SgcdP82347 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SgcdP82347 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SgcdP82347 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms