Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CiitaP79621 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
CiitaP79621 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.8□□□□□ -0.2
CiitaP79621 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.8□□□□□ -0.2
CiitaP79621 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
CiitaP79621 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
CiitaP79621 Gm26083-201ENSMUST00000157904 193 ntBASIC13.8□□□□□ -0.2
CiitaP79621 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CiitaP79621 Gm17376-201ENSMUST00000166016 84 ntBASIC13.8□□□□□ -0.2
CiitaP79621 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Gm27320-201ENSMUST00000184892 109 ntBASIC13.8□□□□□ -0.2
CiitaP79621 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.8□□□□□ -0.2
CiitaP79621 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CiitaP79621 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CiitaP79621 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CiitaP79621 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CiitaP79621 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.79□□□□□ -0.2
CiitaP79621 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CiitaP79621 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CiitaP79621 Gm23270-201ENSMUST00000104055 131 ntBASIC13.79□□□□□ -0.2
CiitaP79621 Gm13315-201ENSMUST00000120376 991 ntBASIC13.79□□□□□ -0.2
CiitaP79621 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CiitaP79621 Gm27243-201ENSMUST00000183964 521 ntBASIC13.79□□□□□ -0.2
CiitaP79621 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.79□□□□□ -0.2
CiitaP79621 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.79□□□□□ -0.2
CiitaP79621 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.79□□□□□ -0.2
CiitaP79621 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.79□□□□□ -0.2
CiitaP79621 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CiitaP79621 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.79□□□□□ -0.2
CiitaP79621 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CiitaP79621 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CiitaP79621 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CiitaP79621 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CiitaP79621 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CiitaP79621 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.78□□□□□ -0.2
CiitaP79621 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.78□□□□□ -0.2
CiitaP79621 Gm25668-201ENSMUST00000157700 129 ntBASIC13.78□□□□□ -0.2
CiitaP79621 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms