Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps33bP59016 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Vps33bP59016 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.9■□□□□ 0.14
Vps33bP59016 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.9■□□□□ 0.14
Vps33bP59016 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Gm43520-201ENSMUST00000197996 164 ntBASIC15.9■□□□□ 0.14
Vps33bP59016 AC115122.1-201ENSMUST00000224850 1040 ntBASIC15.9■□□□□ 0.14
Vps33bP59016 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps33bP59016 Mirlet7i-201ENSMUST00000083472 85 ntBASIC15.9■□□□□ 0.14
Vps33bP59016 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33bP59016 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Vps33bP59016 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Vps33bP59016 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps33bP59016 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Vps33bP59016 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Vps33bP59016 Gm16071-201ENSMUST00000119589 793 ntBASIC15.89■□□□□ 0.13
Vps33bP59016 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.89■□□□□ 0.13
Vps33bP59016 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC15.89■□□□□ 0.13
Vps33bP59016 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.89■□□□□ 0.13
Vps33bP59016 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC15.89■□□□□ 0.13
Vps33bP59016 Gm17826-201ENSMUST00000189720 798 ntBASIC15.89■□□□□ 0.13
Vps33bP59016 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.89■□□□□ 0.13
Vps33bP59016 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Vps33bP59016 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.89■□□□□ 0.13
Vps33bP59016 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps33bP59016 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Vps33bP59016 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Vps33bP59016 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Vps33bP59016 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Vps33bP59016 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps33bP59016 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33bP59016 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vps33bP59016 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.88■□□□□ 0.13
Vps33bP59016 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Gm14193-201ENSMUST00000105067 153 ntBASIC15.88■□□□□ 0.13
Vps33bP59016 Gm11949-201ENSMUST00000117640 372 ntBASIC15.88■□□□□ 0.13
Vps33bP59016 Gm13182-201ENSMUST00000122241 312 ntBASIC15.88■□□□□ 0.13
Vps33bP59016 Mir8115-201ENSMUST00000184992 119 ntBASIC15.88■□□□□ 0.13
Vps33bP59016 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.88■□□□□ 0.13
Vps33bP59016 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.88■□□□□ 0.13
Vps33bP59016 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vps33bP59016 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vps33bP59016 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vps33bP59016 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vps33bP59016 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vps33bP59016 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms